STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG59261.1KEGG: dau:Daud_1571 hypothetical protein. (124 aa)    
Predicted Functional Partners:
AEG59262.1
PFAM: Na+/solute symporter; KEGG: dau:Daud_1570 Na+/solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
 0.996
AEG59264.1
SMART: Exonuclease; TIGRFAM: DNA polymerase III, epsilon subunit; KEGG: dau:Daud_1567 DNA-directed DNA polymerase; PFAM: Exonuclease RNase T and DNA polymerase III.
 
    0.777
AEG59263.1
KEGG: dau:Daud_1569 hypothetical protein.
       0.697
AEG59054.1
Hypothetical protein; KEGG: sli:Slin_2704 peptidase S9 prolyl oligopeptidase active site domain protein.
  
     0.554
acsA
acetate/CoA ligase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.
  
  
 0.552
AEG59707.1
PFAM: AMP-dependent synthetase and ligase; KEGG: tjr:TherJR_1681 AMP-dependent synthetase and ligase.
  
  
 0.552
AEG60226.1
PFAM: AMP-dependent synthetase and ligase; KEGG: chy:CHY_0572 acetyl-coenzyme A synthetase family protein.
  
  
 0.552
AEG59932.1
KEGG: drm:Dred_2123 type I phosphodiesterase/nucleotide pyrophosphatase.
  
     0.509
AEG60153.1
KEGG: adg:Adeg_1917 hypothetical protein.
  
     0.467
AEG60920.1
KEGG: drm:Dred_1332 hypothetical protein.
  
     0.462
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.