STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG59267.1PFAM: AzlC family protein; KEGG: drm:Dred_2568 AzlC family protein. (234 aa)    
Predicted Functional Partners:
AEG59266.1
PFAM: branched-chain amino acid transport; KEGG: drm:Dred_2569 branched-chain amino acid transport.
 
  
 0.964
AEG59265.1
KEGG: dau:Daud_2002 cyclic nucleotide-binding protein; PFAM: protein of unknown function DUF294 nucleotidyltransferase; CBS domain containing protein; Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding; SMART: CBS domain containing protein.
       0.639
AEG58356.1
PFAM: branched-chain amino acid transport; KEGG: bsu:BSU26700 branched-chain amino acid transporter.
 
  
 0.540
AEG58693.1
PFAM: branched-chain amino acid transport; KEGG: afl:Aflv_0264 predicted membrane protein.
  
  
 0.529
AEG59268.1
PFAM: protein of unknown function DUF6 transmembrane; KEGG: sfu:Sfum_2001 hypothetical protein.
       0.509
AEG61454.1
PFAM: protein of unknown function DUF6 transmembrane; KEGG: drm:Dred_1505 hypothetical protein.
  
     0.426
AEG59271.1
KEGG: drm:Dred_2565 cobalt ABC transporter, inner membrane subunit CbiQ; TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein.
 
     0.411
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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