STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG59321.1KEGG: drm:Dred_1859 hypothetical protein; PFAM: metal-dependent phosphohydrolase HD sub domain; protein of unknown function DUF342; SMART: metal-dependent phosphohydrolase HD region. (818 aa)    
Predicted Functional Partners:
AEG60897.1
TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; GAF domain protein; histidine kinase HAMP region domain protein; PAS fold-4 domain protein; KEGG: drm:Dred_1346 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; GAF domain protein; histidine kinase HAMP region domain protein; PAS domain containing protein.
 
   
 0.763
AEG58942.1
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: drm:Dred_0799 diguanylate cyclase; SMART: GGDEF domain containing protein.
 
   0.695
AEG59472.1
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: gbm:Gbem_1202 diguanylate cyclase; SMART: GGDEF domain containing protein; GAF domain protein.
 
   0.694
AEG61565.1
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; Cache domain protein; KEGG: drm:Dred_0651 diguanylate cyclase; SMART: GGDEF domain containing protein; histidine kinase HAMP region domain protein.
 
 
 0.680
AEG60674.1
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: dhd:Dhaf_1751 diguanylate cyclase; SMART: GGDEF domain containing protein.
  
   0.679
AEG61838.1
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: drm:Dred_3086 diguanylate cyclase; SMART: GGDEF domain containing protein; GAF domain protein.
 
   
 0.677
AEG59043.1
TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; CBS domain containing protein; GGDEF domain containing protein; KEGG: dae:Dtox_1949 diguanylate cyclase/phosphodiesterase; SMART: EAL domain protein; GGDEF domain containing protein.
 
 
 0.675
AEG59916.1
TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; response regulator receiver; Hpt domain protein; KEGG: drm:Dred_2145 multi-sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; response regulator receiver.
 
  
 0.671
AEG60596.1
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: clj:CLJU_c30680 putative response regulator; SMART: GGDEF domain containing protein.
  
   0.671
AEG61986.1
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: aae:aq_035 hypothetical protein; SMART: GGDEF domain containing protein.
  
   0.667
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.