STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG59355.1KEGG: pkn:PKH_126950 hypothetical protein. (125 aa)    
Predicted Functional Partners:
AEG59353.1
KEGG: cbk:CLL_A2772 hypothetical protein.
       0.741
AEG59354.1
KEGG: bce:BC1875 phage protein.
       0.741
AEG59356.1
KEGG: drm:Dred_1195 hypothetical protein.
       0.737
AEG59357.1
PFAM: virulence-associated E family protein; KEGG: drm:Dred_1196 virulence-associated E family protein.
       0.697
AEG59351.1
KEGG: drm:Dred_1189 hypothetical protein.
       0.689
AEG59352.1
KEGG: drm:Dred_1191 DNA-directed DNA polymerase; PFAM: DNA-directed DNA polymerase; SMART: DNA-directed DNA polymerase.
       0.689
AEG59349.1
KEGG: drm:Dred_1187 hypothetical protein.
       0.626
AEG59350.1
KEGG: drm:Dred_1188 hypothetical protein.
       0.626
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.