STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG59364.1Hypothetical protein; KEGG: acd:AOLE_10715 putative TonB protein. (74 aa)    
Predicted Functional Partners:
AEG59362.1
KEGG: enc:ECL_03566 phage terminase small subunit.
       0.773
AEG59363.1
KEGG: str:Sterm_1259 phage terminase, large subunit, PBSX family; TIGRFAM: phage terminase, large subunit, PBSX family; PFAM: terminase large subunit.
       0.773
AEG59365.1
KEGG: azc:AZC_0840 hypothetical protein.
       0.773
AEG59361.1
KEGG: pop:POPTR_782800 hypothetical protein.
       0.620
AEG59366.1
KEGG: pyo:PY04960 hypothetical protein.
       0.561
AEG59367.1
KEGG: dal:Dalk_3972 hypothetical protein.
       0.547
AEG59368.1
Hypothetical protein; KEGG: xca:xccb100_0765 pteridine reductase.
       0.444
AEG59369.1
KEGG: tps:THAPSDRAFT_24562 hypothetical protein.
       0.444
AEG59370.1
Hypothetical protein; KEGG: der:Dere_GG24267 GG24267 gene product from transcript GG24267-RA.
       0.444
AEG59371.1
KEGG: cph:Cpha266_1609 hypothetical protein.
       0.424
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.