STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG59377.1KEGG: ctp:CTRG_04225 hypothetical protein. (475 aa)    
Predicted Functional Partners:
AEG59378.1
KEGG: gca:Galf_2026 hypothetical protein.
       0.762
AEG59379.1
KEGG: gyc:GYMC61_0644 toxin secretion/phage lysis holin; TIGRFAM: toxin secretion/phage lysis holin; PFAM: Holin toxin secretion/phage lysis.
       0.762
AEG59380.1
KEGG: bld:BLi01542 hypothetical protein.
       0.762
AEG59381.1
N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin; copper amine oxidase-like domain-containing protein; KEGG: hmo:HM1_2806 N-acetylmuramoyl-L-alanine amidase, putative; SMART: cell wall hydrolase/autolysin.
       0.762
AEG59376.1
Hypothetical protein; KEGG: mdo:100015927 similar to NUMA1 variant protein.
       0.752
AEG59375.1
Hypothetical protein; KEGG: adg:Adeg_0754 copper amine oxidase domain protein.
       0.606
AEG59374.1
KEGG: amt:Amet_2434 hypothetical protein.
       0.475
AEG59382.1
Hypothetical protein; KEGG: kpu:KP1_2317 phosphatidylglycerophosphatase B.
       0.454
AEG59373.1
KEGG: ckr:CKR_2872 hypothetical protein.
       0.446
AEG59372.1
KEGG: cfl:Cfla_0521 PA14 domain protein.
       0.440
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.