STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG59383.1KEGG: llm:llmg_2265 hypothetical protein. (319 aa)    
Predicted Functional Partners:
rny
YmdA/YtgF protein; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family.
   
    0.699
AEG60574.1
PFAM: Fibronectin-binding A domain protein; protein of unknown function DUF814; KEGG: drm:Dred_1691 fibronectin-binding A domain-containing protein.
  
    0.670
AEG59453.1
KEGG: pth:PTH_0396 hypothetical protein; TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain-containing protein.
  
     0.528
AEG60746.1
PFAM: Coat F domain protein; KEGG: ccb:Clocel_0868 coat F domain-containing protein.
  
     0.521
AEG59384.1
Hypothetical protein; KEGG: hse:Hsero_4503 autotransporter adhesin protein.
       0.516
AEG59926.1
KEGG: drm:Dred_0606 hypothetical protein.
  
     0.505
AEG61730.1
KEGG: ccb:Clocel_0824 hypothetical protein.
  
     0.487
AEG59454.1
KEGG: pth:PTH_0397 cytotoxic translational repressor.
  
     0.474
AEG59876.1
PFAM: transposase IS116/IS110/IS902 family protein; KEGG: amt:Amet_2132 transposase IS116/IS110/IS902 family protein.
  
     0.420
AEG61006.1
PFAM: transposase IS116/IS110/IS902 family protein; KEGG: amt:Amet_2132 transposase IS116/IS110/IS902 family protein.
  
     0.420
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.