STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG59397.1KEGG: adg:Adeg_0259 dTDP-4-dehydrorhamnose 3,5-epimerase. (153 aa)    
Predicted Functional Partners:
AEG59396.1
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
 
 
 0.999
AEG59399.1
KEGG: pjd:Pjdr2_4988 dTDP-glucose 4,6-dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
 
 0.998
AEG59398.1
Glucose-1-phosphate thymidyltransferase; KEGG: pth:PTH_1078 dTDP-glucose pyrophosphorylase; TIGRFAM: glucose-1-phosphate thymidyltransferase; PFAM: Nucleotidyl transferase.
 
  
 0.994
AEG59606.1
PFAM: Nucleotidyl transferase; transferase hexapeptide repeat containing protein; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: drm:Dred_2334 nucleotidyl transferase.
  
 
 0.925
AEG59392.1
PFAM: glycosyl transferase family 2; Methyltransferase type 11; KEGG: asa:ASA_1441 glycosyl transferase, group 2 family protein.
 
 
 0.913
AEG60223.1
KEGG: drm:Dred_1897 glucose-1-phosphate cytidylyltransferase; TIGRFAM: glucose-1-phosphate cytidylyltransferase; PFAM: Nucleotidyl transferase.
 
  
 0.853
AEG61877.1
TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; Undecaprenyl-phosphate galactose phosphotransferase, WbaP; KEGG: drm:Dred_3137 undecaprenyl-phosphate galactose phosphotransferase; PFAM: sugar transferase.
  
  
 0.845
AEG60751.1
Mannose-1-phosphate guanylyltransferase; KEGG: gka:GK3304 mannose-6-phosphate isomerase; PFAM: Nucleotidyl transferase; Cupin 2 conserved barrel domain protein.
  
  
 0.826
AEG61874.1
TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: hmo:HM1_1237 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase.
  
  
 0.826
AEG60224.1
PFAM: NAD-dependent epimerase/dehydratase; KEGG: drm:Dred_1896 NAD-dependent epimerase/dehydratase.
 
  
 0.728
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.