STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG59404.1PFAM: membrane protein of unknown function; KEGG: drm:Dred_2504 hypothetical protein. (111 aa)    
Predicted Functional Partners:
AEG60604.1
KEGG: drm:Dred_1675 hypothetical protein.
  
     0.763
AEG60196.1
KEGG: drm:Dred_1924 hypothetical protein.
  
     0.716
AEG61290.1
PFAM: protein of unknown function DUF322; KEGG: drm:Dred_1067 hypothetical protein.
  
     0.712
AEG60928.1
KEGG: drm:Dred_1322 small, acid-soluble spore proteins, alpha/be.
  
     0.708
AEG59405.1
KEGG: drm:Dred_2503 stage II sporulation P family protein; TIGRFAM: stage II sporulation protein P; PFAM: Stage II sporulation P family protein.
 
     0.706
rpsT
Ribosomal protein S20; Binds directly to 16S ribosomal RNA.
       0.705
AEG60915.1
PFAM: PspC domain protein; KEGG: drm:Dred_1339 phage shock protein C, PspC.
  
    0.669
AEG60197.1
PFAM: AAA ATPase central domain protein; peptidase M41; KEGG: drm:Dred_1923 vesicle-fusing ATPase; SMART: AAA ATPase; Belongs to the AAA ATPase family.
  
    0.643
AEG61366.1
PFAM: protein of unknown function DUF1292; KEGG: drm:Dred_0776 hypothetical protein; Belongs to the UPF0473 family.
  
     0.640
AEG59197.1
KEGG: drm:Dred_2695 hypothetical protein.
  
     0.634
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.