STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG59601.1Hypothetical protein; KEGG: act:ACLA_030660 translation regulator (Cya5), putative. (119 aa)    
Predicted Functional Partners:
AEG59602.1
KEGG: pjd:Pjdr2_1561 phage uncharacterized protein, XkdX family; TIGRFAM: phage uncharacterized protein, XkdX family; PFAM: uncharacterised protein XkdX.
       0.773
AEG59592.1
Hypothetical protein; KEGG: lsp:Bsph_1782 putative phage tail tape measure protein.
       0.741
AEG59593.1
KEGG: cpy:Cphy_2954 peptidoglycan-binding LysM; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM.
       0.741
AEG59594.1
KEGG: cdl:CDR20291_1451 putative phage cell wall hydrolase.
       0.741
AEG59595.1
KEGG: str:Sterm_1444 hypothetical protein.
       0.741
AEG59596.1
KEGG: cpy:Cphy_2951 phage protein.
       0.741
AEG59597.1
PFAM: Baseplate J family protein; KEGG: cdf:CD2900 putative phage tail protein.
       0.741
AEG59598.1
KEGG: cpy:Cphy_2949 hypothetical protein.
       0.741
AEG59599.1
KEGG: cbe:Cbei_0926 hypothetical protein.
       0.741
AEG59600.1
Hypothetical protein.
       0.741
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.