STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG59734.1KEGG: hmo:HM1_1646 bacitracin abc transporter; PFAM: ABC transporter related; SMART: AAA ATPase. (305 aa)    
Predicted Functional Partners:
AEG59733.1
KEGG: hmo:HM1_1647 hypothetical protein.
 
 0.984
AEG60736.1
KEGG: drm:Dred_1589 ABC-2 type transporter; manually curated; PFAM: ABC-2 type transporter.
 
  
 0.819
AEG60456.1
PFAM: ABC-2 type transporter; KEGG: cac:CA_C3268 hypothetical protein.
 
  
 0.755
AEG59797.1
KEGG: dhd:Dhaf_0213 membrane protein NosY.
 
 
 0.567
AEG59796.1
KEGG: dhd:Dhaf_0212 hypothetical protein.
 
 
 0.545
AEG59793.1
KEGG: dhd:Dhaf_0209 nitrous-oxide reductase; PFAM: cytochrome c oxidase subunit II.
 
 
 0.544
AEG59795.1
KEGG: dhd:Dhaf_0211 periplasmic copper-binding; PFAM: periplasmic copper-binding; SMART: Carbohydrate-binding and sugar hydrolysis; Parallel beta-helix repeat.
 
 0.540
AEG59131.1
KEGG: drt:Dret_1645 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
    
0.522
AEG59735.1
Response regulator receiver; KEGG: cbt:CLH_2461 regulatory protein VanR; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver.
     
 0.522
AEG59736.1
KEGG: bwe:BcerKBAB4_2314 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein.
  
    0.514
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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