STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG59788.1KEGG: dhd:Dhaf_0204 hypothetical protein. (78 aa)    
Predicted Functional Partners:
AEG59789.1
PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: dhd:Dhaf_0205 Rieske (2Fe-2S) domain protein.
       0.773
AEG59790.1
PFAM: Cytochrome b/b6 domain; KEGG: dhd:Dhaf_0206 cytochrome b/b6 domain protein.
       0.773
AEG59791.1
PFAM: Cytochrome b/b6 domain; KEGG: dhd:Dhaf_0207 subunit IV of cytochrome bc complex petd.
       0.746
AEG59792.1
KEGG: dhd:Dhaf_0208 hypothetical protein.
       0.630
AEG59787.1
KEGG: dhd:Dhaf_0203 hypothetical protein.
       0.547
AEG59793.1
KEGG: dhd:Dhaf_0209 nitrous-oxide reductase; PFAM: cytochrome c oxidase subunit II.
       0.479
AEG59786.1
Hypothetical protein; Manually curated; KEGG: dhd:Dhaf_0199 hypothetical protein.
       0.406
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.