STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG59793.1KEGG: dhd:Dhaf_0209 nitrous-oxide reductase; PFAM: cytochrome c oxidase subunit II. (634 aa)    
Predicted Functional Partners:
AEG59795.1
KEGG: dhd:Dhaf_0211 periplasmic copper-binding; PFAM: periplasmic copper-binding; SMART: Carbohydrate-binding and sugar hydrolysis; Parallel beta-helix repeat.
 
  
 0.957
AEG59797.1
KEGG: dhd:Dhaf_0213 membrane protein NosY.
 
 
 0.957
AEG59796.1
KEGG: dhd:Dhaf_0212 hypothetical protein.
 
  
 0.937
AEG59794.1
KEGG: dhd:Dhaf_0210 hypothetical protein.
 
  
 0.928
nifH
Nitrogenase iron protein; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
     
 0.915
AEG61653.1
Nitrogenase molybdenum-iron protein beta chain; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation; Belongs to the NifD/NifK/NifE/NifN family.
     
 0.905
AEG61654.1
KEGG: drm:Dred_2818 nitrogenase molybdenum-iron protein alpha chain; TIGRFAM: nitrogenase molybdenum-iron protein alpha chain; nitrogenase component I, alpha chain; PFAM: oxidoreductase/nitrogenase component 1.
     
 0.905
AEG59798.1
KEGG: dhd:Dhaf_0214 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 
 0.815
AEG58392.1
Cyclic nucleotide-binding protein; KEGG: pth:PTH_2806 transcriptional regulator; PFAM: cyclic nucleotide-binding; sigma-54 factor interaction domain-containing protein; SMART: cyclic nucleotide-binding.
  
  
 0.736
AEG59792.1
KEGG: dhd:Dhaf_0208 hypothetical protein.
  
  
 0.736
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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