STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG59848.1PFAM: inner-membrane translocator; KEGG: drm:Dred_2174 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (310 aa)    
Predicted Functional Partners:
AEG59846.1
KEGG: drm:Dred_2176 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.998
AEG59847.1
PFAM: inner-membrane translocator; KEGG: drm:Dred_2175 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
0.998
AEG59845.1
PFAM: basic membrane lipoprotein; KEGG: drm:Dred_2177 basic membrane lipoprotein.
 
 
 0.994
xpt
Xanthine phosphoribosyltransferase; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis.
 
     0.837
AEG59728.1
KEGG: dtu:Dtur_1644 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
     0.589
AEG59428.1
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
 
  
 0.507
AEG62023.1
KEGG: str:Sterm_3540 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase.
     0.496
AEG58808.1
PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; [2Fe-2S]-binding domain-containing protein; ferredoxin; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: dae:Dtox_3440 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding.
       0.454
deoC
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
  
  
 0.441
AEG61241.1
TIGRFAM: pyrimidine-nucleoside phosphorylase; KEGG: drm:Dred_1101 pyrimidine-nucleoside phosphorylase; PFAM: glycosyl transferase family 3; Glycosyl transferase, family 3-like; Pyrimidine nucleoside phosphorylase domain.
     
 0.418
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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