STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG59867.1KEGG: drm:Dred_2170 hypothetical protein. (221 aa)    
Predicted Functional Partners:
AEG61205.1
KEGG: drm:Dred_0322 Fis family transcriptional regulator.
 
     0.734
AEG61878.1
PFAM: O-antigen polymerase; KEGG: drm:Dred_3138 O-antigen polymerase.
 
     0.728
ftsL
Cell division protein FtsL; Essential cell division protein; Belongs to the FtsL family.
  
     0.724
AEG60645.1
KEGG: pth:PTH_1117 hypothetical protein.
  
     0.719
AEG61852.1
KEGG: drm:Dred_3104 hypothetical protein.
  
    0.718
AEG60478.1
KEGG: drm:Dred_1746 hypothetical protein.
  
     0.694
AEG59543.1
KEGG: drm:Dred_2377 hypothetical protein.
  
     0.691
AEG60948.1
KEGG: drm:Dred_1310 transport-associated; PFAM: transport-associated; SMART: Transport-associated and nodulation region.
  
     0.681
AEG59523.1
KEGG: drm:Dred_2397 hypothetical protein.
  
    0.668
AEG61313.1
PFAM: Fimbrial assembly family protein; KEGG: adg:Adeg_1717 fimbrial assembly family protein.
 
     0.668
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.