STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG59877.1KEGG: gym:GYMC10_5374 hypothetical protein. (899 aa)    
Predicted Functional Partners:
AEG61754.1
KEGG: bse:Bsel_3007 phage portal protein, HK97 family; TIGRFAM: phage portal protein, HK97 family; PFAM: portal protein.
  
 
 0.532
AEG61749.1
TIGRFAM: phage head-tail adaptor; KEGG: bcu:BCAH820_4380 phage head-tail adaptor, putative.
  
   0.526
AEG61752.1
TIGRFAM: phage major capsid protein, HK97 family; KEGG: hmo:HM1_2880 phage major capsid protein, hk97 family.
   
 
 0.517
AEG58424.1
KEGG: drm:Dred_0068 hypothetical protein.
   
   0.426
AEG58452.1
KEGG: drm:Dred_0083 hypothetical protein.
   
   0.426
AEG59213.1
KEGG: mtb:TBMG_02531 hypothetical protein.
   
   0.426
AEG59776.1
KEGG: cpy:Cphy_3870 hypothetical protein.
   
   0.426
AEG61415.1
PFAM: Protein of unknown function DUF2599; KEGG: bcq:BCQ_1310 hypothetical protein.
   
   0.426
AEG61750.1
TIGRFAM: uncharacterized phage protein (possible DNA packaging); KEGG: ccb:Clocel_0785 bacteriophage QLRG family, putative DNA packaging.
   
   0.426
AEG60027.1
Hypothetical protein; KEGG: dal:Dalk_4561 bacteriophage tail assembly protein-like protein.
  
  
 0.414
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.