STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG59901.1KEGG: drm:Dred_2149 regulatory protein GntR, HTH; PFAM: regulatory protein GntR HTH; TrkA-C domain protein; SMART: regulatory protein GntR HTH. (204 aa)    
Predicted Functional Partners:
AEG59933.1
KEGG: drm:Dred_2122 hypothetical protein.
  
     0.597
AEG59706.1
Manually curated; PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix domain protein; KEGG: tjr:TherJR_1682 transcriptional regulator, XRE family; SMART: helix-turn-helix domain protein.
  
  
 0.536
AEG60379.1
KEGG: gka:GK2895 hypothetical protein; PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.
  
  
 0.536
AEG61601.1
Cupin 2 conserved barrel domain protein; KEGG: nth:Nther_2571 transcriptional regulator, XRE family; PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.
  
  
 0.536
AEG61334.1
KEGG: drm:Dred_1015 hypothetical protein.
  
     0.528
AEG60202.1
KEGG: drm:Dred_1918 hypothetical protein.
  
     0.513
AEG60645.1
KEGG: pth:PTH_1117 hypothetical protein.
  
     0.504
AEG58978.1
PFAM: membrane-bound metal-dependent hydrolase; KEGG: drm:Dred_0844 membrane-bound metal-dependent hydrolase.
  
     0.496
AEG59900.1
PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein; KEGG: drm:Dred_2150 thiamine biosynthesis protein ThiH.
       0.488
AEG58968.1
KEGG: drm:Dred_0837 hypothetical protein.
  
    0.476
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.