STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG59966.1KEGG: dhd:Dhaf_4416 hypothetical protein. (328 aa)    
Predicted Functional Partners:
AEG59961.1
PFAM: protein of unknown function DUF112 transmembrane; KEGG: dsy:DSY0654 hypothetical protein.
 
  
 0.908
AEG62031.1
PFAM: protein of unknown function DUF112 transmembrane; KEGG: oca:OCAR_6740 integral membrane protein.
 
  
 0.908
AEG59960.1
KEGG: met:M446_4285 hypothetical protein.
  
  
 0.607
AEG62033.1
KEGG: mch:Mchl_4220 hypothetical protein.
  
  
 0.607
AEG60662.1
PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: vap:Vapar_3328 tripartite ATP-independent periplasmic transporter DctQ component.
  
     0.587
AEG59965.1
KEGG: dvm:DvMF_2005 altronate dehydratase; PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein.
 
     0.562
AEG60663.1
TRAP dicarboxylate transporter, DctP subunit; KEGG: gka:GK1974 C4-dicarboxylate transport system (C4-dicarboxylate-binding protein); TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7.
  
     0.538
AEG60661.1
KEGG: gka:GK1972 transporter; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit.
  
     0.535
AEG59964.1
PFAM: SAF domain protein; KEGG: dba:Dbac_2155 SAF domain protein.
       0.483
AEG58893.1
PFAM: protein of unknown function DUF81; KEGG: bca:BCE_1737 hypothetical protein.
  
     0.439
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.