STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG60020.1KEGG: fpl:Ferp_1025 hypothetical protein. (159 aa)    
Predicted Functional Partners:
AEG60021.1
KEGG: btr:Btr_2621 hypothetical protein.
       0.815
AEG60022.1
KEGG: ppp:PHYPADRAFT_166969 hypothetical protein.
       0.815
AEG60023.1
KEGG: clj:CLJU_c31310 phage-like protein.
       0.789
AEG60019.1
KEGG: cfl:Cfla_2260 tail sheath protein.
       0.781
AEG60017.1
KEGG: hau:Haur_1774 hypothetical protein.
       0.760
AEG60016.1
Hypothetical protein; KEGG: lga:LGAS_1829 ABC-type multidrug transport system, ATPase and permease component.
       0.726
AEG60018.1
Hypothetical protein; KEGG: dae:Dtox_0532 4Fe-4S ferredoxin iron-sulfur binding domain protein.
       0.714
AEG60024.1
Hypothetical protein; KEGG: abu:Abu_1669 Mu-like prophage I protein, putative.
       0.557
AEG60025.1
KEGG: npu:Npun_R2610 SPP1 family phage head morphogenesis protein; TIGRFAM: phage head morphogenesis protein, SPP1 gp7 family; PFAM: head morphogenesis protein SPP1 gp7.
       0.479
AEG60026.1
KEGG: dap:Dacet_2219 hypothetical protein.
       0.475
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.