STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG60028.1KEGG: amt:Amet_1950 hypothetical protein. (178 aa)    
Predicted Functional Partners:
AEG60032.1
PFAM: Mor transcription activator domain protein; KEGG: dae:Dtox_4221 Mor transcription activator domain protein.
 
     0.898
AEG60026.1
KEGG: dap:Dacet_2219 hypothetical protein.
 
     0.858
AEG60027.1
Hypothetical protein; KEGG: dal:Dalk_4561 bacteriophage tail assembly protein-like protein.
 
     0.843
AEG60034.1
KEGG: mca:MCA2948 prophage MuMc02, host-nuclease inhibitor protein.
 
     0.826
AEG60025.1
KEGG: npu:Npun_R2610 SPP1 family phage head morphogenesis protein; TIGRFAM: phage head morphogenesis protein, SPP1 gp7 family; PFAM: head morphogenesis protein SPP1 gp7.
 
     0.822
AEG60031.1
KEGG: dae:Dtox_4222 hypothetical protein.
       0.821
AEG60042.1
Helix-turn-helix domain protein; KEGG: amt:Amet_4393 hypothetical protein; PFAM: helix-turn-helix domain protein; SMART: AAA ATPase.
 
     0.774
AEG60029.1
KEGG: hth:HTH_0884 hypothetical protein.
       0.773
AEG60030.1
KEGG: amt:Amet_4371 hypothetical protein.
       0.773
AEG60024.1
Hypothetical protein; KEGG: abu:Abu_1669 Mu-like prophage I protein, putative.
       0.732
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.