STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG60217.1KEGG: drm:Dred_1905 hypothetical protein. (459 aa)    
Predicted Functional Partners:
scpA
Chromosome segregation and condensation protein ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
  
 
 0.780
AEG59523.1
KEGG: drm:Dred_2397 hypothetical protein.
  
     0.772
AEG59016.1
KEGG: drm:Dred_2897 hypothetical protein.
  
     0.770
AEG60478.1
KEGG: drm:Dred_1746 hypothetical protein.
  
     0.758
AEG62070.1
PFAM: Tetratricopeptide TPR_1 repeat-containing protein; KEGG: drm:Dred_3296 TPR repeat-containing protein.
 
     0.744
AEG60171.1
KEGG: drm:Dred_1946 hypothetical protein.
  
     0.742
AEG60787.1
KEGG: drm:Dred_1473 ABC-type sugar transport system periplasmic component-like protein.
  
    0.742
AEG58451.1
KEGG: drm:Dred_0082 peptidoglycan-binding LysM; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM.
  
  
 0.732
AEG61313.1
PFAM: Fimbrial assembly family protein; KEGG: adg:Adeg_1717 fimbrial assembly family protein.
  
   
 0.727
AEG59614.1
KEGG: drm:Dred_2326 hypothetical protein.
  
     0.723
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.