STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG60234.1KEGG: drm:Dred_1888 hypothetical protein; Belongs to the UPF0342 family. (128 aa)    
Predicted Functional Partners:
miaB
tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.
       0.807
mutS
DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.
       0.636
AEG61250.1
KEGG: drm:Dred_1094 hypothetical protein.
  
     0.583
AEG59207.1
KEGG: drm:Dred_2685 hypothetical protein.
  
     0.566
AEG59309.1
KEGG: drm:Dred_2533 signal transduction histidine kinase regulating citrate/malate metabolism.
  
     0.541
ftsL
Cell division protein FtsL; Essential cell division protein; Belongs to the FtsL family.
  
     0.535
AEG58848.1
KEGG: drm:Dred_2959 hypothetical protein.
  
     0.514
AEG59543.1
KEGG: drm:Dred_2377 hypothetical protein.
  
     0.499
AEG60928.1
KEGG: drm:Dred_1322 small, acid-soluble spore proteins, alpha/be.
  
     0.498
AEG59016.1
KEGG: drm:Dred_2897 hypothetical protein.
  
     0.495
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.