STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG60244.1KEGG: dae:Dtox_2410 sporulation lipoprotein, YhcN/YlaJ family; TIGRFAM: sporulation lipoprotein, YhcN/YlaJ family; PFAM: Sporulation lipoprotein YhcN/YlaJ-like. (161 aa)    
Predicted Functional Partners:
AEG58850.1
KEGG: drm:Dred_2201 hypothetical protein.
  
     0.483
AEG58778.1
KEGG: ttm:Tthe_0084 hypothetical protein.
  
     0.473
AEG59820.1
KEGG: drm:Dred_2201 hypothetical protein.
  
     0.460
AEG60604.1
KEGG: drm:Dred_1675 hypothetical protein.
  
     0.456
AEG60243.1
PFAM: Aluminium resistance family protein; KEGG: drm:Dred_1879 aluminium resistance family protein.
       0.449
AEG61247.1
PFAM: small acid-soluble spore protein alpha/beta type; KEGG: drm:Dred_1096 small acid-soluble spore protein, alpha/beta type.
  
    0.446
AEG61248.1
KEGG: drm:Dred_1095 hypothetical protein; TIGRFAM: stage II sporulation protein M; PFAM: protein of unknown function DUF95 transmembrane.
 
     0.446
AEG61263.1
KEGG: drm:Dred_1089 hypothetical protein.
  
     0.442
AEG59286.1
KEGG: drm:Dred_2556 ABC-type nitrate/sulfonate/taurine/bicarbonate transport systems, periplasmic component.
  
    0.426
AEG61821.1
SMART: PDZ/DHR/GLGF domain protein; KEGG: drm:Dred_3069 PDZ/DHR/GLGF domain-containing protein.
  
    0.418
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.