STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG60249.1KEGG: sat:SYN_01170 putative cytoplasmic protein. (83 aa)    
Predicted Functional Partners:
AEG60252.1
PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: amt:Amet_1464 dinitrogenase iron-molybdenum cofactor biosynthesis protein.
 
     0.914
AEG60253.1
KEGG: dsy:DSY3440 hypothetical protein.
 
     0.912
AEG60254.1
KEGG: dhd:Dhaf_1984 cobyrinic acid ac-diamide synthase.
 
     0.907
AEG60250.1
PFAM: protein of unknown function DUF134; KEGG: dhd:Dhaf_1981 protein of unknown function DUF134; Belongs to the UPF0251 family.
 
     0.870
AEG60255.1
PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: dhd:Dhaf_1986 dinitrogenase iron-molybdenum cofactor biosynthesis protein.
 
     0.810
AEG60251.1
PFAM: nitrogen-fixing NifU domain protein; KEGG: ckr:CKR_3218 hypothetical protein.
       0.600
AEG61764.1
KEGG: swo:Swol_0287 hypothetical protein.
  
     0.485
AEG60909.1
PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: drm:Dred_1341 dinitrogenase iron-molybdenum cofactor biosynthesis.
 
     0.468
AEG60910.1
PFAM: protein of unknown function DUF134; KEGG: drm:Dred_1340 hypothetical protein; Belongs to the UPF0251 family.
 
     0.462
AEG59852.1
PFAM: Late competence development protein ComFB; KEGG: toc:Toce_1330 late competence development protein ComFB.
  
     0.440
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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