STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG60254.1KEGG: dhd:Dhaf_1984 cobyrinic acid ac-diamide synthase. (295 aa)    
Predicted Functional Partners:
AEG60252.1
PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: amt:Amet_1464 dinitrogenase iron-molybdenum cofactor biosynthesis protein.
 
  
 0.967
AEG60250.1
PFAM: protein of unknown function DUF134; KEGG: dhd:Dhaf_1981 protein of unknown function DUF134; Belongs to the UPF0251 family.
 
     0.943
AEG60255.1
PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: dhd:Dhaf_1986 dinitrogenase iron-molybdenum cofactor biosynthesis protein.
  
 0.929
AEG60253.1
KEGG: dsy:DSY3440 hypothetical protein.
 
    
0.892
AEG60249.1
KEGG: sat:SYN_01170 putative cytoplasmic protein.
 
     0.887
AEG60251.1
PFAM: nitrogen-fixing NifU domain protein; KEGG: ckr:CKR_3218 hypothetical protein.
     
 0.788
AEG60840.1
KEGG: drm:Dred_1434 beta-lactamase domain-containing protein.
 
     0.763
AEG60910.1
PFAM: protein of unknown function DUF134; KEGG: drm:Dred_1340 hypothetical protein; Belongs to the UPF0251 family.
 
     0.744
AEG60909.1
PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: drm:Dred_1341 dinitrogenase iron-molybdenum cofactor biosynthesis.
 
  
 0.726
AEG61407.1
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; ferredoxin; molybdopterin oxidoreductase Fe4S4 region; molybdopterin oxidoreductase; KEGG: toc:Toce_0243 FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
  
 
 0.415
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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