STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG60266.1PFAM: Uncharacterised protein family UPF0324; KEGG: drm:Dred_1866 hypothetical protein. (376 aa)    
Predicted Functional Partners:
AEG60267.1
Hypothetical protein.
       0.732
AEG60218.1
KEGG: drm:Dred_1904 hypothetical protein.
  
     0.488
AEG60856.1
KEGG: drm:Dred_1426 hypothetical protein.
  
     0.477
AEG60853.1
KEGG: drm:Dred_1428 hypothetical protein.
  
     0.471
AEG59933.1
KEGG: drm:Dred_2122 hypothetical protein.
  
     0.439
AEG60265.1
Response regulator receiver; KEGG: hmo:HM1_2078 transcriptional regulatory protein; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver.
       0.427
AEG60857.1
PFAM: protein of unknown function DUF81; KEGG: drm:Dred_1425 hypothetical protein.
 
    0.421
AEG61991.1
KEGG: drm:Dred_0931 hypothetical protein.
  
     0.421
AEG60115.1
ATP-binding region ATPase domain protein; KEGG: drm:Dred_2000 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein.
  
     0.413
AEG60854.1
PFAM: protein of unknown function DUF81; KEGG: drm:Dred_1427 hypothetical protein.
 
    0.413
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.