STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG60276.1PFAM: Uncharacterised protein family UPF0324; KEGG: drm:Dred_1861 hypothetical protein. (357 aa)    
Predicted Functional Partners:
AEG60277.1
Hypothetical protein.
       0.668
AEG60275.1
KEGG: drm:Dred_1862 hypothetical protein.
       0.545
AEG60278.1
PFAM: UspA domain-containing protein; KEGG: drm:Dred_1860 UspA domain-containing protein.
       0.487
AEG60853.1
KEGG: drm:Dred_1428 hypothetical protein.
  
     0.471
AEG60856.1
KEGG: drm:Dred_1426 hypothetical protein.
  
     0.468
AEG60857.1
PFAM: protein of unknown function DUF81; KEGG: drm:Dred_1425 hypothetical protein.
 
   
 0.400
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.