STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG60294.1PFAM: small multidrug resistance protein; KEGG: bcb:BCB4264_A4914 SugE protein. (120 aa)    
Predicted Functional Partners:
AEG60295.1
PFAM: small multidrug resistance protein; KEGG: bcg:BCG9842_B0325 SugE protein.
 
     0.946
AEG60493.1
PFAM: small multidrug resistance protein; KEGG: esi:Exig_0411 small multidrug resistance protein.
 
  
 0.838
AEG60406.1
PFAM: small multidrug resistance protein; KEGG: drm:Dred_3289 small multidrug resistance protein.
 
     0.766
AEG60296.1
PFAM: Glycosyl transferase, family 4, conserved region; KEGG: dae:Dtox_4113 glycosyl transferase family 4.
       0.401
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.