STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG60316.1PFAM: Methyltransferase type 11; KEGG: dae:Dtox_2159 methyltransferase type 12. (200 aa)    
Predicted Functional Partners:
AEG58342.1
KEGG: dae:Dtox_0495 hypothetical protein.
  
     0.645
AEG61699.1
KEGG: dae:Dtox_4247 hypothetical protein.
  
     0.643
AEG60315.1
KEGG: dae:Dtox_2812 agmatine deiminase; PFAM: Porphyromonas-type peptidyl-arginine deiminase.
 
    0.528
AEG61429.1
ATP-binding region ATPase domain protein; KEGG: dae:Dtox_3198 signal transduction histidine kinase regulating citrate/malate metabolism; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein.
  
     0.508
AEG58344.1
PFAM: extracellular solute-binding protein family 1; KEGG: dae:Dtox_0497 extracellular solute-binding protein family 1.
  
     0.497
AEG58961.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
     0.487
AEG61987.1
KEGG: dae:Dtox_2503 chromosome partitioning ATPase-like protein.
  
    0.474
AEG58336.1
PFAM: DnaJ homologue, subfamily C, member 28, conserved domain; KEGG: dae:Dtox_3161 hypothetical protein.
  
     0.472
AEG59916.1
TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; response regulator receiver; Hpt domain protein; KEGG: drm:Dred_2145 multi-sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; response regulator receiver.
   
 
 0.451
AEG61072.1
PFAM: PilT protein domain protein; KEGG: dau:Daud_2130 PilT domain-containing protein.
  
     0.439
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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