STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG60374.1PFAM: extracellular solute-binding protein family 5; KEGG: drm:Dred_1562 extracellular solute-binding protein. (564 aa)    
Predicted Functional Partners:
AEG60373.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: drm:Dred_1563 binding-protein-dependent transport systems inner membrane component.
 
 
 0.942
AEG60372.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: drm:Dred_1564 binding-protein-dependent transport systems inner membrane component.
 
 0.940
AEG60371.1
TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: drm:Dred_1565 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
  
 0.901
AEG60370.1
TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: drm:Dred_1566 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
  
 0.891
AEG61598.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr6673 ATP-dependent peptide transporter membrane subunit.
 
 0.852
AEG61599.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dba:Dbac_2921 binding-protein-dependent transport systems inner membrane component.
 
 0.850
AEG59469.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: drm:Dred_2452 binding-protein-dependent transport systems inner membrane component.
 
 0.849
AEG59468.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: drm:Dred_2453 binding-protein-dependent transport systems inner membrane component.
 
 0.845
AEG60376.1
PFAM: Cupin 2 conserved barrel domain protein; KEGG: drm:Dred_1561 cupin 2 domain-containing protein.
 
     0.826
AEG60375.1
PFAM: peptidase M24; creatinase; KEGG: aac:Aaci_1001 peptidase M24; Belongs to the peptidase M24B family.
  
  
 0.781
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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