STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG60388.1PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: mta:Moth_2307 hypothetical protein. (428 aa)    
Predicted Functional Partners:
AEG60389.1
PFAM: FAD linked oxidase domain protein; KEGG: gtn:GTNG_0371 glycolate oxidase subunit.
 
 0.999
AEG60872.1
PFAM: FAD linked oxidase domain protein; KEGG: adg:Adeg_0562 FAD linked oxidase domain protein.
 
 0.998
AEG60871.1
PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: drm:Dred_1372 hypothetical protein.
  
  
 
0.907
AEG59670.1
Catalase; KEGG: mbu:Mbur_0523 catalase; PFAM: Catalase related subgroup; Catalase domain protein; Belongs to the catalase family.
     
  0.900
AEG60656.1
KEGG: tpd:Teth39_1971 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase.
     
 0.900
AEG60658.1
KEGG: tpd:Teth39_1974 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase.
     
 0.900
AEG61536.1
PFAM: protein of unknown function DUF162; KEGG: drm:Dred_0689 hypothetical protein.
 
 
 0.880
AEG61535.1
PFAM: protein of unknown function DUF162; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: drm:Dred_0690 hypothetical protein.
 
 
0.801
AEG60921.1
KEGG: drm:Dred_1330 formate dehydrogenase; PFAM: coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein.
  
 
 0.548
AEG59753.1
KEGG: cno:NT01CX_1623 hypothetical protein.
  
 
 0.514
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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