STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG60390.1PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pjd:Pjdr2_1915 short-chain dehydrogenase/reductase SDR. (299 aa)    
Predicted Functional Partners:
AEG60756.1
PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: ccb:Clocel_3267 alcohol dehydrogenase GroES domain-containing protein.
 
  
 0.732
AEG58855.1
PFAM: Ankyrin; KEGG: spu:585023 similar to NACHT domain protein, putative.
   
 0.642
AEG59258.1
PFAM: metallophosphoesterase; KEGG: drm:Dred_2571 metallophosphoesterase.
   
 
 0.612
AEG59916.1
TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; response regulator receiver; Hpt domain protein; KEGG: drm:Dred_2145 multi-sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; response regulator receiver.
   
 
 0.565
AEG58378.1
PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: dae:Dtox_1936 electron transfer flavoprotein alpha/beta-subunit.
  
 
 0.549
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
   
 
 0.522
AEG60483.1
Peptidyl-prolyl cis-trans isomerase cyclophilin type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 
 0.501
AEG60389.1
PFAM: FAD linked oxidase domain protein; KEGG: gtn:GTNG_0371 glycolate oxidase subunit.
   
 
 0.490
AEG60391.1
KEGG: slp:Slip_1884 P pilus assembly/Cpx signaling pathway periplasmic inhibitor/zinc-resistance associated protein.
       0.489
AEG59670.1
Catalase; KEGG: mbu:Mbur_0523 catalase; PFAM: Catalase related subgroup; Catalase domain protein; Belongs to the catalase family.
  
 0.479
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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