STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG60404.1KEGG: dae:Dtox_0339 hypothetical protein. (208 aa)    
Predicted Functional Partners:
AEG60403.1
PFAM: protein of unknown function DUF1980; KEGG: dae:Dtox_0337 protein of unknown function DUF1980.
 
     0.813
AEG58747.1
KEGG: dae:Dtox_2669 hypothetical protein.
  
     0.769
AEG59499.1
KEGG: dae:Dtox_0663 hypothetical protein.
  
    0.767
AEG60402.1
PFAM: permease; KEGG: dae:Dtox_0336 permease.
 
    0.731
AEG61987.1
KEGG: dae:Dtox_2503 chromosome partitioning ATPase-like protein.
  
    0.725
rpsZ
Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.
  
 
 0.684
AEG61972.1
KEGG: dae:Dtox_2491 Flp pilus assembly protein CpaB; TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain protein.
  
     0.682
AEG58804.1
PFAM: GCN5-related N-acetyltransferase; KEGG: dae:Dtox_4297 GCN5-related N-acetyltransferase.
 
     0.675
AEG58746.1
KEGG: dae:Dtox_3371 O-antigen polymerase.
  
     0.637
AEG59378.1
KEGG: gca:Galf_2026 hypothetical protein.
  
     0.628
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.