STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG60406.1PFAM: small multidrug resistance protein; KEGG: drm:Dred_3289 small multidrug resistance protein. (128 aa)    
Predicted Functional Partners:
AEG60407.1
PFAM: regulatory protein TetR; KEGG: oih:OB0995 transcriptional regulator.
  
    0.783
AEG60295.1
PFAM: small multidrug resistance protein; KEGG: bcg:BCG9842_B0325 SugE protein.
  
     0.771
AEG60492.1
PFAM: small multidrug resistance protein; KEGG: dhd:Dhaf_1073 small multidrug resistance protein.
 
     0.771
AEG60294.1
PFAM: small multidrug resistance protein; KEGG: bcb:BCB4264_A4914 SugE protein.
 
     0.766
AEG60405.1
Pyruvate formate-lyase activating enzyme; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family.
       0.578
AEG60408.1
TIGRFAM: formate acetyltransferase; KEGG: drm:Dred_0039 formate acetyltransferase; PFAM: pyruvate formate-lyase PFL; formate C-acetyltransferase glycine radical.
       0.498
AEG60493.1
PFAM: small multidrug resistance protein; KEGG: esi:Exig_0411 small multidrug resistance protein.
 
  
0.414
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.