STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG60411.1PFAM: amidohydrolase 2; KEGG: tjr:TherJR_1661 amidohydrolase 2. (259 aa)    
Predicted Functional Partners:
AEG59707.1
PFAM: AMP-dependent synthetase and ligase; KEGG: tjr:TherJR_1681 AMP-dependent synthetase and ligase.
 
  
 0.609
AEG58758.1
PFAM: amidohydrolase 2; KEGG: drm:Dred_2759 amidohydrolase 2.
 
     0.483
AEG59332.1
PFAM: AMP-dependent synthetase and ligase; KEGG: pth:PTH_0838 acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
 
  
 0.466
AEG59706.1
Manually curated; PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix domain protein; KEGG: tjr:TherJR_1682 transcriptional regulator, XRE family; SMART: helix-turn-helix domain protein.
 
     0.448
AEG60226.1
PFAM: AMP-dependent synthetase and ligase; KEGG: chy:CHY_0572 acetyl-coenzyme A synthetase family protein.
 
  
 0.436
cshA
DEAD/DEAH box helicase domain protein; DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA-dependent ATPase activity; Belongs to the DEAD box helicase family. CshA subfamily.
       0.431
AEG59812.1
PFAM: homocysteine S-methyltransferase; dihydropteroate synthase DHPS; Methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein; KEGG: drm:Dred_2207 homocysteine S-methyltransferase.
  
    0.429
AEG60412.1
PFAM: protein of unknown function DUF81; KEGG: drm:Dred_0424 hypothetical protein.
       0.415
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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