STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG60415.1Spore germination protein; KEGG: pth:PTH_1839 hypothetical protein; TIGRFAM: spore germination protein; PFAM: Spore germination protein. (367 aa)    
Predicted Functional Partners:
AEG60414.1
KEGG: pth:PTH_1838 hypothetical protein; TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein.
  
 0.959
AEG60416.1
PFAM: GerA spore germination protein; KEGG: pth:PTH_1840 hypothetical protein.
 
  
 0.950
AEG60413.1
KEGG: pth:PTH_1837 hypothetical protein.
 
     0.803
AEG60600.1
KEGG: dae:Dtox_0584 germination protein, Ger(X)C family; TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein.
  
 0.797
AEG58406.1
KEGG: drm:Dred_0053 spore germination B3 GerAC family protein; TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein.
  
 0.795
AEG58407.1
PFAM: GerA spore germination protein; KEGG: drm:Dred_0054 GerA spore germination protein.
 
  
 0.773
AEG60599.1
PFAM: GerA spore germination protein; KEGG: dae:Dtox_0585 GerA spore germination protein.
 
  
 0.770
AEG60794.1
PFAM: GerA spore germination protein; KEGG: drm:Dred_2663 GerA spore germination protein.
 
  
 0.741
AEG60519.1
PFAM: GerA spore germination protein; KEGG: drm:Dred_1732 GerA spore germination protein.
 
  
 0.698
AEG59989.1
Sporulation integral membrane protein YlbJ; KEGG: drm:Dred_2080 nucleoside recognition domain-containing protein; TIGRFAM: sporulation integral membrane protein YlbJ; PFAM: nucleoside recognition domain protein.
  
     0.679
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.