STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG60420.1KEGG: drm:Dred_1803 1A family penicillin-binding protein; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase. (703 aa)    
Predicted Functional Partners:
AEG59944.1
KEGG: drm:Dred_2100 1A family penicillin-binding protein; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase.
 
 
0.939
AEG60668.1
TIGRFAM: penicillin-binding protein, 1A family; KEGG: drm:Dred_1646 1A family penicillin-binding protein; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase.
  
  
 
0.920
AEG61509.1
KEGG: drm:Dred_0716 DivIVA family protein; TIGRFAM: DivIVA domain; PFAM: DivIVA family protein.
   
 
 0.838
AEG61558.1
SMART: PASTA domain containing protein; TIGRFAM: stage V sporulation protein D; KEGG: drm:Dred_0669 stage V sporulation protein D; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; PASTA domain containing protein.
 
 
0.720
AEG61553.1
KEGG: drm:Dred_0674 stage V sporulation protein E; TIGRFAM: stage V sporulation protein E; cell division protein FtsW; PFAM: cell cycle protein; Belongs to the SEDS family.
  
 
 
 0.700
AEG61909.1
Peptidase M23; KEGG: drm:Dred_3173 peptidase M23B; PFAM: Peptidase M23; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM.
  
   
 0.659
AEG59297.1
TIGRFAM: penicillin-binding protein 2; KEGG: drm:Dred_2545 peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain.
 
 
 
 0.641
murC
UDP-N-acetylmuramate/alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
 
   
 0.625
ddl
D-alanine/D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
 
  
 0.623
AEG58941.1
PFAM: Peptidase M23; Lytic transglycosylase catalytic; KEGG: dae:Dtox_2504 peptidase M23.
  
   
 0.615
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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