STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG60424.1PFAM: Late competence development protein ComFB; KEGG: drm:Dred_1799 hypothetical protein. (94 aa)    
Predicted Functional Partners:
AEG61835.1
KEGG: drm:Dred_3081 phosphoribosyltransferase.
  
  
 0.737
pfkA-2
Phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. Mixed-substrate PFK group III subfamily.
       0.679
AEG60423.1
PFAM: glycosyl transferase group 1; KEGG: drm:Dred_1800 glycosyl transferase, group 1.
       0.586
AEG61878.1
PFAM: O-antigen polymerase; KEGG: drm:Dred_3138 O-antigen polymerase.
  
     0.462
AEG59620.1
PFAM: Protein of unknown function DUF2225; KEGG: drm:Dred_2320 tetratricopeptide domain-containing protein.
  
     0.413
AEG60426.1
PFAM: Extracellular ligand-binding receptor; KEGG: drm:Dred_2240 extracellular ligand-binding receptor.
       0.403
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.