STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG60432.1PFAM: protein of unknown function DUF1538; KEGG: str:Sterm_0908 protein of unknown function DUF1538. (526 aa)    
Predicted Functional Partners:
AEG60431.1
KEGG: eel:EUBELI_01840 hypothetical protein.
 
     0.887
AEG59276.1
PFAM: protein of unknown function DUF344; KEGG: tai:Taci_0333 protein of unknown function DUF344.
  
     0.487
whiA
Protein of unknown function DUF199; Involved in cell division and chromosome segregation.
  
    0.478
AEG61835.1
KEGG: drm:Dred_3081 phosphoribosyltransferase.
   
    0.465
AEG60977.1
KEGG: toc:Toce_0279 hypothetical protein.
  
    0.435
AEG61167.1
PFAM: Prephenate dehydrogenase; KEGG: drm:Dred_1150 prephenate dehydrogenase.
  
    0.427
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.