STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG60447.1PFAM: Radical SAM domain protein; KEGG: dal:Dalk_4338 radical SAM domain protein. (443 aa)    
Predicted Functional Partners:
AEG60448.1
PFAM: cyclase/dehydrase; KEGG: cpo:COPRO5265_0653 polyketide cyclase/dehydrase superfamily.
       0.773
AEG60446.1
PFAM: cyclase family protein; KEGG: tle:Tlet_0260 cyclase family protein.
       0.686
AEG60449.1
PFAM: NAD-dependent epimerase/dehydratase; KEGG: nde:NIDE0700 putative dihydroflavanol 4-reductase.
     
 0.630
AEG59891.1
SMART: Transcription regulator AsnC-type; KEGG: drm:Dred_2158 AsnC family transcriptional regulator.
  
 0.549
AEG60450.1
KEGG: rci:LRC395 hypothetical protein.
       0.527
AEG59887.1
KEGG: drm:Dred_2162 uroporphyrin-III C-methyltransferase; TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Uroporphyrinogen III synthase HEM4.
 
  
 0.506
AEG59801.1
KEGG: adg:Adeg_1254 putative transcriptional regulator, AsnC family.
 
  
 0.505
AEG59892.1
KEGG: drm:Dred_2157 AsnC family transcriptional regulator.
 
  
 0.478
AEG60451.1
PFAM: Methyltransferase type 11; KEGG: bpf:BpOF4_20064 SAM-dependent methyltransferase.
       0.475
AEG60452.1
Hypothetical protein; KEGG: cbt:CLH_0633 putative arylesterase.
       0.475
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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