STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG60456.1PFAM: ABC-2 type transporter; KEGG: cac:CA_C3268 hypothetical protein. (391 aa)    
Predicted Functional Partners:
AEG60457.1
KEGG: ckr:CKR_3098 hypothetical protein; PFAM: ABC transporter related; SMART: AAA ATPase.
  
 0.991
AEG60738.1
KEGG: drm:Dred_1587 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
  
 0.985
AEG60737.1
KEGG: drm:Dred_1588 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
  
 0.967
AEG60458.1
PFAM: secretion protein HlyD family protein; KEGG: tjr:TherJR_1943 secretion protein HlyD family protein.
 
  
 0.949
AEG61136.1
KEGG: dhd:Dhaf_3296 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
  
 0.927
AEG60324.1
KEGG: dhd:Dhaf_3150 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
  
 0.878
AEG60888.1
KEGG: drm:Dred_1356 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
  
 0.865
AEG60671.1
KEGG: hmo:HM1_1690 abc transporter; PFAM: ABC transporter related; SMART: AAA ATPase.
  
 0.825
AEG61813.1
KEGG: drm:Dred_3061 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
  
 0.816
AEG60739.1
PFAM: secretion protein HlyD family protein; KEGG: drm:Dred_1586 secretion protein HlyD family protein.
 
  
 0.809
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.