STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG60478.1KEGG: drm:Dred_1746 hypothetical protein. (133 aa)    
Predicted Functional Partners:
AEG61296.1
PFAM: Sporulation stage III protein AF; KEGG: drm:Dred_1061 hypothetical protein.
  
    0.784
AEG60217.1
KEGG: drm:Dred_1905 hypothetical protein.
  
     0.758
AEG59543.1
KEGG: drm:Dred_2377 hypothetical protein.
  
     0.748
AEG59523.1
KEGG: drm:Dred_2397 hypothetical protein.
  
     0.743
AEG60171.1
KEGG: drm:Dred_1946 hypothetical protein.
  
     0.742
ftsL
Cell division protein FtsL; Essential cell division protein; Belongs to the FtsL family.
  
     0.740
AEG61289.1
PFAM: Protein of unknown function DUF2273; KEGG: drm:Dred_1068 hypothetical protein.
  
     0.697
AEG59867.1
KEGG: drm:Dred_2170 hypothetical protein.
  
     0.694
AEG60208.1
KEGG: drm:Dred_1912 hypothetical protein.
  
     0.683
AEG59484.1
KEGG: drm:Dred_2438 putative anti-sigma-28 factor, FlgM; TIGRFAM: Anti-sigma-28 factor FlgM family protein; PFAM: Anti-sigma-28 factor FlgM family protein.
  
     0.649
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.