STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG60516.1KEGG: sth:STH2455 hypothetical protein. (56 aa)    
Predicted Functional Partners:
AEG60517.1
KEGG: drm:Dred_1734 spore germination B3 GerAC family protein; TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein.
       0.773
AEG60518.1
KEGG: drm:Dred_1733 spore germination protein; TIGRFAM: spore germination protein; PFAM: Spore germination protein.
       0.773
AEG60519.1
PFAM: GerA spore germination protein; KEGG: drm:Dred_1732 GerA spore germination protein.
       0.636
AEG60515.1
PFAM: PBS lyase HEAT domain protein repeat-containing protein; KEGG: drm:Dred_1735 heat repeat-containing PBS lyase.
       0.528
AEG60520.1
PFAM: Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; KEGG: hmo:HM1_2762 2-oxoglutarate oxidoreductase, gamma subunit, putative.
       0.447
AEG60521.1
2-oxoglutarate synthase; KEGG: hmo:HM1_2763 2-oxoacid:ferredoxin oxidoreductase, beta subunit; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein.
       0.447
AEG60522.1
PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Transketolase domain-containing protein; KEGG: pth:PTH_0847 pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit.
       0.447
AEG60523.1
KEGG: aco:Amico_0794 4Fe-4S ferredoxin iron-sulfur binding domain protein.
       0.447
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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