STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG60517.1KEGG: drm:Dred_1734 spore germination B3 GerAC family protein; TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein. (415 aa)    
Predicted Functional Partners:
AEG60518.1
KEGG: drm:Dred_1733 spore germination protein; TIGRFAM: spore germination protein; PFAM: Spore germination protein.
 
  
 0.967
AEG60519.1
PFAM: GerA spore germination protein; KEGG: drm:Dred_1732 GerA spore germination protein.
 
  
 0.920
AEG60516.1
KEGG: sth:STH2455 hypothetical protein.
       0.773
AEG58408.1
KEGG: drm:Dred_0055 spore germination protein; TIGRFAM: spore germination protein; PFAM: Spore germination protein.
  
 0.759
AEG60793.1
KEGG: drm:Dred_2664 spore germination protein; TIGRFAM: spore germination protein; PFAM: Spore germination protein.
 
  
 0.719
AEG60598.1
KEGG: adg:Adeg_0296 spore germination protein; TIGRFAM: spore germination protein; PFAM: Spore germination protein.
  
 0.698
AEG60794.1
PFAM: GerA spore germination protein; KEGG: drm:Dred_2663 GerA spore germination protein.
 
  
 0.677
AEG58404.1
KEGG: drm:Dred_0051 spore germination protein; TIGRFAM: spore germination protein; PFAM: Spore germination protein.
 
  
 0.658
AEG58407.1
PFAM: GerA spore germination protein; KEGG: drm:Dred_0054 GerA spore germination protein.
 
  
 0.658
AEG61182.1
KEGG: drm:Dred_1137 hypothetical protein.
  
     0.630
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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