STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG60525.1PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: drm:Dred_1729 BFD/(2Fe-2S)-binding domain-containing protein. (95 aa)    
Predicted Functional Partners:
AEG60524.1
PFAM: FAD dependent oxidoreductase; KEGG: drm:Dred_1730 FAD dependent oxidoreductase.
 
  
 0.959
AEG60526.1
KEGG: drm:Dred_1728 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
 
   
 0.946
AEG60527.1
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: fpl:Ferp_2556 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
 
     0.939
AEG60528.1
KEGG: tko:TK0119 proline dehydrogenase, alpha subunit.
 
     0.939
AEG59970.1
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
       0.454
AEG59106.1
KEGG: drm:Dred_2805 glutamate synthase (ferredoxin); PFAM: glutamine amidotransferase class-II; glutamate synthase; ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein.
     
 0.451
AEG60521.1
2-oxoglutarate synthase; KEGG: hmo:HM1_2763 2-oxoacid:ferredoxin oxidoreductase, beta subunit; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein.
     
 0.409
AEG60522.1
PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Transketolase domain-containing protein; KEGG: pth:PTH_0847 pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit.
     
 0.409
AEG60523.1
KEGG: aco:Amico_0794 4Fe-4S ferredoxin iron-sulfur binding domain protein.
     
 0.408
AEG60520.1
PFAM: Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; KEGG: hmo:HM1_2762 2-oxoglutarate oxidoreductase, gamma subunit, putative.
       0.406
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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