STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG60587.1PFAM: major facilitator superfamily MFS_1; KEGG: drm:Dred_1678 major facilitator transporter. (483 aa)    
Predicted Functional Partners:
AEG60586.1
KEGG: drm:Dred_1679 hypothetical protein.
 
    0.924
AEG60588.1
KEGG: drm:Dred_1677 phosphosulfolactate synthase; PFAM: (2R)-phospho-3-sulfolactate synthase ComA.
 
     0.861
AEG60603.1
PFAM: protein of unknown function DUF441; KEGG: drm:Dred_1676 hypothetical protein.
 
     0.746
AEG61246.1
PFAM: protein of unknown function DUF441; KEGG: drm:Dred_1097 hypothetical protein.
 
     0.739
AEG61819.1
KEGG: drm:Dred_3068 hypothetical protein.
  
    0.643
AEG60196.1
KEGG: drm:Dred_1924 hypothetical protein.
  
     0.618
AEG61355.1
KEGG: drm:Dred_0906 hypothetical protein.
  
    0.613
AEG58847.1
KEGG: drm:Dred_2960 hypothetical protein.
  
    0.582
AEG59523.1
KEGG: drm:Dred_2397 hypothetical protein.
  
     0.559
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.