STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG60643.1PFAM: glycosyl transferase family 2; Tetratricopeptide TPR_1 repeat-containing protein; KEGG: drm:Dred_1409 glycosyl transferase family protein. (582 aa)    
Predicted Functional Partners:
AEG60645.1
KEGG: pth:PTH_1117 hypothetical protein.
 
     0.880
AEG60641.1
KEGG: pth:PTH_1120 hypothetical protein.
  
0.847
AEG60644.1
PFAM: glycosyl transferase family 2; Tetratricopeptide TPR_1 repeat-containing protein; KEGG: drm:Dred_1408 glycosyl transferase family protein.
 
    
0.846
AEG60642.1
PFAM: glycosyl transferase family 2; Tetratricopeptide TPR_1 repeat-containing protein; KEGG: drm:Dred_1410 glycosyl transferase family protein.
 
    
0.840
AEG61877.1
TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; Undecaprenyl-phosphate galactose phosphotransferase, WbaP; KEGG: drm:Dred_3137 undecaprenyl-phosphate galactose phosphotransferase; PFAM: sugar transferase.
 
  
 0.824
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
  
  
 0.718
AEG59916.1
TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; response regulator receiver; Hpt domain protein; KEGG: drm:Dred_2145 multi-sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; response regulator receiver.
  
 
 0.687
AEG60640.1
KEGG: drm:Dred_1411 hypothetical protein.
 
     0.679
AEG59392.1
PFAM: glycosyl transferase family 2; Methyltransferase type 11; KEGG: asa:ASA_1441 glycosyl transferase, group 2 family protein.
 
  
 0.660
AEG60900.1
Polysaccharide deacetylase; KEGG: mar:MAE_03610 TPR repeat-containing protein; PFAM: polysaccharide deacetylase; Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat.
 
  
 0.592
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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