STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG60653.1Manually curated; PFAM: response regulator receiver; ANTAR domain protein; KEGG: drm:Dred_1289 response regulator receiver/ANTAR domain-containing protein; SMART: response regulator receiver. (208 aa)    
Predicted Functional Partners:
AEG60652.1
KEGG: drm:Dred_1292 signal transduction histidine kinase; PFAM: histidine kinase dimerisation/phosphoacceptor; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein.
 
   
 0.889
AEG60647.1
Ethanolamine utilization EutA; KEGG: drm:Dred_1297 reactivating factor for ethanolamine ammonia lyase; manually curated; PFAM: Ethanolamine utilisation EutA.
 
   
 0.657
nifH
Nitrogenase iron protein; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
   
  
 0.555
AEG60648.1
KEGG: drm:Dred_1296 ethanolamine ammonia-lyase small subunit; PFAM: Ethanolamine ammonia-lyase light chain; Belongs to the EutC family.
 
   
 0.545
ilvD-2
TIGRFAM: dihydroxy-acid dehydratase; KEGG: aar:Acear_1923 dihydroxyacid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; Belongs to the IlvD/Edd family.
       0.539
AEG59106.1
KEGG: drm:Dred_2805 glutamate synthase (ferredoxin); PFAM: glutamine amidotransferase class-II; glutamate synthase; ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein.
  
  
 0.503
AEG60649.1
KEGG: drm:Dred_1295 ethanolamine ammonia lyase large subunit; PFAM: Ethanolamine ammonia lyase large subunit.
 
   
 0.499
AEG60651.1
KEGG: drm:Dred_1293 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver.
 
    
0.499
AEG60655.1
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: tpd:Teth39_1970 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding.
       0.491
AEG60656.1
KEGG: tpd:Teth39_1971 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase.
       0.453
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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