STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG60710.1Sporulation protein YtxC; KEGG: drm:Dred_1610 hypothetical protein; TIGRFAM: sporulation protein YtxC; PFAM: Sporulation protein YtxC. (301 aa)    
Predicted Functional Partners:
AEG58490.1
KEGG: drm:Dred_0119 hypothetical protein; TIGRFAM: spore cortex biosynthesis protein YabQ; PFAM: Spore cortex biosynthesis protein, YabQ-like.
  
     0.761
AEG60709.1
PFAM: protein of unknown function DUF445; KEGG: drm:Dred_1611 hypothetical protein.
 
     0.711
AEG59433.1
KEGG: drm:Dred_2474 hypothetical protein.
  
     0.694
AEG58408.1
KEGG: drm:Dred_0055 spore germination protein; TIGRFAM: spore germination protein; PFAM: Spore germination protein.
  
    0.692
AEG60597.1
KEGG: ttm:Tthe_0372 spore germination protein; TIGRFAM: spore germination protein; PFAM: Spore germination protein.
  
    0.690
AEG62087.1
KEGG: drm:Dred_3313 hypothetical protein.
 
     0.649
AEG62088.1
Sporulation protein YyaC; KEGG: drm:Dred_3314 hypothetical protein; TIGRFAM: sporulation protein YyaC; PFAM: protein of unknown function DUF1256.
  
     0.646
AEG60598.1
KEGG: adg:Adeg_0296 spore germination protein; TIGRFAM: spore germination protein; PFAM: Spore germination protein.
  
    0.629
AEG60793.1
KEGG: drm:Dred_2664 spore germination protein; TIGRFAM: spore germination protein; PFAM: Spore germination protein.
  
    0.613
AEG60799.1
KEGG: drm:Dred_1470 hypothetical protein.
  
    0.612
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.