STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG60754.1KEGG: mgi:Mflv_0209 hypothetical protein. (540 aa)    
Predicted Functional Partners:
AEG60752.1
PFAM: glycosyl transferase family 2; KEGG: nca:Noca_0721 general secretion pathway protein E.
 
  
 0.892
AEG60753.1
PFAM: glycosyl transferase family 2; KEGG: cth:Cthe_3097 glycosyl transferase family protein.
  
  
 0.823
AEG60751.1
Mannose-1-phosphate guanylyltransferase; KEGG: gka:GK3304 mannose-6-phosphate isomerase; PFAM: Nucleotidyl transferase; Cupin 2 conserved barrel domain protein.
 
    0.677
AEG59392.1
PFAM: glycosyl transferase family 2; Methyltransferase type 11; KEGG: asa:ASA_1441 glycosyl transferase, group 2 family protein.
  
  
 0.661
AEG59908.1
PFAM: Stress responsive alpha-beta barrel domain-containing protein; KEGG: cbe:Cbei_3528 stress responsive alpha-beta barrel domain-containing protein.
  
     0.552
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
  
 0.544
AEG61573.1
PFAM: major facilitator superfamily MFS_1; KEGG: drm:Dred_0644 major facilitator transporter.
  
  
 0.508
AEG59916.1
TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; response regulator receiver; Hpt domain protein; KEGG: drm:Dred_2145 multi-sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; response regulator receiver.
  
  
 0.506
AEG60900.1
Polysaccharide deacetylase; KEGG: mar:MAE_03610 TPR repeat-containing protein; PFAM: polysaccharide deacetylase; Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat.
  
  
 0.485
AEG61877.1
TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; Undecaprenyl-phosphate galactose phosphotransferase, WbaP; KEGG: drm:Dred_3137 undecaprenyl-phosphate galactose phosphotransferase; PFAM: sugar transferase.
       0.454
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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